|
|
|
@ -24,13 +24,13 @@ begin
|
|
|
|
chapter*[isadof_tour::text_section]\<open>\<^isadof>: A Guided Tour\<close>
|
|
|
|
chapter*[isadof_tour::text_section]\<open>\<^isadof>: A Guided Tour\<close>
|
|
|
|
|
|
|
|
|
|
|
|
text\<open>
|
|
|
|
text\<open>
|
|
|
|
In this chapter, we will give a introduction into using \<^isadof> for users that want to create and
|
|
|
|
In this chapter, we will give an introduction into using \<^isadof> for users that want to create and
|
|
|
|
maintain documents following an existing document ontology.
|
|
|
|
maintain documents following an existing document ontology.
|
|
|
|
\<close>
|
|
|
|
\<close>
|
|
|
|
|
|
|
|
|
|
|
|
section*[getting_started::technical]\<open>Getting Started\<close>
|
|
|
|
section*[getting_started::technical]\<open>Getting Started\<close>
|
|
|
|
text\<open>
|
|
|
|
text\<open>
|
|
|
|
As an alternative to installing \<^isadof>{} locally, the latest official release \<^isadof> is also
|
|
|
|
As an alternative to installing \<^isadof>{} locally, the latest official release of \<^isadof> is also
|
|
|
|
available on \href{https://cloud.docker.com/u/logicalhacking/}{Docker Hub}. Thus, if you have
|
|
|
|
available on \href{https://cloud.docker.com/u/logicalhacking/}{Docker Hub}. Thus, if you have
|
|
|
|
\href{https://www.docker.com}{Docker} installed and
|
|
|
|
\href{https://www.docker.com}{Docker} installed and
|
|
|
|
your installation of Docker supports X11 application, you can start \<^isadof> as follows:
|
|
|
|
your installation of Docker supports X11 application, you can start \<^isadof> as follows:
|
|
|
|
@ -85,7 +85,7 @@ text\<open>
|
|
|
|
We start by extracting the \<^isadof> archive:
|
|
|
|
We start by extracting the \<^isadof> archive:
|
|
|
|
@{boxed_bash [display]\<open>ë\prompt{}ë tar xf ë\href{\isadofarchiveurl}{\isadofarchiven}ë\<close>}
|
|
|
|
@{boxed_bash [display]\<open>ë\prompt{}ë tar xf ë\href{\isadofarchiveurl}{\isadofarchiven}ë\<close>}
|
|
|
|
This will create a directory \texttt{\isadofdirn} containing \<^isadof> distribution.
|
|
|
|
This will create a directory \texttt{\isadofdirn} containing \<^isadof> distribution.
|
|
|
|
Next, we need to invoke the \<^boxed_bash>\<open>install\<close> script. If necessary, the installations
|
|
|
|
Next, we need to invoke the \<^boxed_bash>\<open>install\<close> script. If necessary, the installation
|
|
|
|
automatically downloads additional dependencies from the AFP (\<^url>\<open>https://www.isa-afp.org\<close>),
|
|
|
|
automatically downloads additional dependencies from the AFP (\<^url>\<open>https://www.isa-afp.org\<close>),
|
|
|
|
namely the AFP entries ``Functional Automata''~@{cite "nipkow.ea:functional-Automata-afp:2004"}
|
|
|
|
namely the AFP entries ``Functional Automata''~@{cite "nipkow.ea:functional-Automata-afp:2004"}
|
|
|
|
and ``Regular Sets and Expressions''~@{cite "kraus.ea:regular-sets-afp:2010"}. This might take a
|
|
|
|
and ``Regular Sets and Expressions''~@{cite "kraus.ea:regular-sets-afp:2010"}. This might take a
|
|
|
|
@ -138,7 +138,7 @@ Isabelle/DOF Installer
|
|
|
|
/usr/local/Isabelleë\isabelleversion/bin/isabelleë build -D . \<close>}
|
|
|
|
/usr/local/Isabelleë\isabelleversion/bin/isabelleë build -D . \<close>}
|
|
|
|
|
|
|
|
|
|
|
|
After the successful installation, you can explore the examples (in the sub-directory
|
|
|
|
After the successful installation, you can explore the examples (in the sub-directory
|
|
|
|
\<^boxed_bash>\<open>examples\<close> or create your own project. On the first start, the session
|
|
|
|
\<^boxed_bash>\<open>examples\<close>) or create your own project. On the first start, the session
|
|
|
|
\<^boxed_bash>\<open>Isabelle_DOF\<close> will be built automatically. If you want to pre-build this
|
|
|
|
\<^boxed_bash>\<open>Isabelle_DOF\<close> will be built automatically. If you want to pre-build this
|
|
|
|
session and all example documents, execute:
|
|
|
|
session and all example documents, execute:
|
|
|
|
@{boxed_bash [display]\<open>ë\prompt{\isadofdirn}ë isabelle build -D . \<close>}
|
|
|
|
@{boxed_bash [display]\<open>ë\prompt{\isadofdirn}ë isabelle build -D . \<close>}
|
|
|
|
@ -158,13 +158,13 @@ Now use the following coëëmmand line to build the session:
|
|
|
|
isabelle build -D myproject \<close>}
|
|
|
|
isabelle build -D myproject \<close>}
|
|
|
|
The created project uses the default configuration (the ontology for writing academic papers
|
|
|
|
The created project uses the default configuration (the ontology for writing academic papers
|
|
|
|
(scholarly\_paper) using a report layout based on the article class (\<^boxed_latex>\<open>scrartcl\<close>) of
|
|
|
|
(scholarly\_paper) using a report layout based on the article class (\<^boxed_latex>\<open>scrartcl\<close>) of
|
|
|
|
the KOMA-Script bundle~@{cite "kohm:koma-script:2019"}. The directory \<^boxed_bash>\<open>myproject\<close>
|
|
|
|
the KOMA-Script bundle~@{cite "kohm:koma-script:2019"}). The directory \<^boxed_bash>\<open>myproject\<close>
|
|
|
|
contains the \<^isadof>-setup for your new document. To check the document formally, including the
|
|
|
|
contains the \<^isadof>-setup for your new document. To check the document formally, including the
|
|
|
|
generation of the document in PDF, you only need to execute
|
|
|
|
generation of the document in PDF, you only need to execute
|
|
|
|
|
|
|
|
|
|
|
|
@{boxed_bash [display]\<open>ë\prompt{}ë isabelle build -d . myproject \<close>}
|
|
|
|
@{boxed_bash [display]\<open>ë\prompt{myproject}ë isabelle build -d . myproject \<close>}
|
|
|
|
|
|
|
|
|
|
|
|
The dictory \<^boxed_bash>\<open>myproject\<close> contains the following files and directories:
|
|
|
|
The directory \<^boxed_bash>\<open>myproject\<close> contains the following files and directories:
|
|
|
|
\begin{center}
|
|
|
|
\begin{center}
|
|
|
|
\begin{minipage}{.9\textwidth}
|
|
|
|
\begin{minipage}{.9\textwidth}
|
|
|
|
\dirtree{%
|
|
|
|
\dirtree{%
|
|
|
|
@ -172,7 +172,7 @@ The dictory \<^boxed_bash>\<open>myproject\<close> contains the following files
|
|
|
|
.2 myproject.
|
|
|
|
.2 myproject.
|
|
|
|
.3 document.
|
|
|
|
.3 document.
|
|
|
|
.4 build\DTcomment{Build Script}.
|
|
|
|
.4 build\DTcomment{Build Script}.
|
|
|
|
.4 isadof.cfg\DTcomment{\<^isadof> configuraiton}.
|
|
|
|
.4 isadof.cfg\DTcomment{\<^isadof> configuration}.
|
|
|
|
.4 preamble.tex\DTcomment{Manual \<^LaTeX>-configuration}.
|
|
|
|
.4 preamble.tex\DTcomment{Manual \<^LaTeX>-configuration}.
|
|
|
|
.3 ROOT\DTcomment{Isabelle build-configuration}.
|
|
|
|
.3 ROOT\DTcomment{Isabelle build-configuration}.
|
|
|
|
}
|
|
|
|
}
|
|
|
|
@ -193,14 +193,14 @@ users are:
|
|
|
|
|
|
|
|
|
|
|
|
text\<open>
|
|
|
|
text\<open>
|
|
|
|
Creating a new document setup requires two decisions:
|
|
|
|
Creating a new document setup requires two decisions:
|
|
|
|
\<^item> which ontologies (\<^eg>, scholarly\_paper) are required and
|
|
|
|
\<^item> which ontologies (\<^eg>, scholarly\_paper) are required, and
|
|
|
|
\<^item> which document template (layout)\index{document template} should be used
|
|
|
|
\<^item> which document template (layout)\index{document template} should be used
|
|
|
|
(\<^eg>, scrartcl\index{scrartcl}). Some templates (\<^eg>, lncs) require that the users manually
|
|
|
|
(\<^eg>, scrartcl\index{scrartcl}). Some templates require that the users manually
|
|
|
|
obtains and adds the necessary \<^LaTeX> class file (\<^eg>, \<^boxed_bash>\<open>llncs.cls\<close>.
|
|
|
|
obtains and adds the necessary \<^LaTeX> class file.
|
|
|
|
This is due to licensing restrictions).\<close>
|
|
|
|
This is due to licensing restrictions).\<close>
|
|
|
|
text\<open>
|
|
|
|
text\<open>
|
|
|
|
This can be configured by using the command-line options of of \<^boxed_bash>\<open>mkroot_DOF\<close>. In
|
|
|
|
This can be configured by using the command-line options of \<^boxed_bash>\<open>mkroot_DOF\<close>. In
|
|
|
|
Particular, \<^boxed_bash>\<open>-o\<close> allows selecting the ontology and \<^boxed_bash>\<open>-t\<close> allows to selecting
|
|
|
|
Particular, \<^boxed_bash>\<open>-o\<close> allows selecting the ontology and \<^boxed_bash>\<open>-t\<close> allows selecting
|
|
|
|
the document template. The built-in help (using \<^boxed_bash>\<open>-h\<close>) shows all available options
|
|
|
|
the document template. The built-in help (using \<^boxed_bash>\<open>-h\<close>) shows all available options
|
|
|
|
as well as a complete list of the available document templates and ontologies:
|
|
|
|
as well as a complete list of the available document templates and ontologies:
|
|
|
|
|
|
|
|
|
|
|
|
@ -233,31 +233,31 @@ subsection\<open>Writing Academic Papers\<close>
|
|
|
|
text\<open>
|
|
|
|
text\<open>
|
|
|
|
The ontology \<^boxed_theory_text>\<open>scholarly_paper\<close>
|
|
|
|
The ontology \<^boxed_theory_text>\<open>scholarly_paper\<close>
|
|
|
|
\<^index>\<open>ontology!scholarly\_paper\<close> is an ontology modeling
|
|
|
|
\<^index>\<open>ontology!scholarly\_paper\<close> is an ontology modeling
|
|
|
|
academic/scientific papers, with a slight bias to texts in the domain of mathematics and engineering.
|
|
|
|
academic/scientific papers, with a slight bias towards texts in the domain of mathematics and engineering.
|
|
|
|
We explain first the principles of its underlying ontology, and then we present two ''real''
|
|
|
|
We explain first the principles of its underlying ontology, and then we present two ``real''
|
|
|
|
examples from our own publication practice.
|
|
|
|
examples from our own publication practice.
|
|
|
|
\<close>
|
|
|
|
\<close>
|
|
|
|
text\<open>
|
|
|
|
text\<open>
|
|
|
|
\<^enum> The iFM 2020 paper~@{cite "taha.ea:philosophers:2020"} is a typical mathematical text,
|
|
|
|
\<^enum> The iFM 2020 paper~@{cite "taha.ea:philosophers:2020"} is a typical mathematical text,
|
|
|
|
heavy in definitions with complex mathematical notation and a lot of non-trivial cross-referencing
|
|
|
|
heavy in definitions with complex mathematical notation and a lot of non-trivial cross-referencing
|
|
|
|
between statements, definitions and proofs which is ontologically tracked. However, wrt.
|
|
|
|
between statements, definitions and proofs which are ontologically tracked. However, wrt.
|
|
|
|
the possible linking between the underlying formal theory and this mathematical presentation,
|
|
|
|
the possible linking between the underlying formal theory and this mathematical presentation,
|
|
|
|
it follows a pragmatic path without any ``deep'' linking to types, terms and theorems,
|
|
|
|
it follows a pragmatic path without any ``deep'' linking to types, terms and theorems,
|
|
|
|
deliberately not exploiting \<^isadof> 's full potential with this regard.
|
|
|
|
deliberately not exploiting \<^isadof> 's full potential with this regard.
|
|
|
|
\<^enum> In the CICM 2018 paper~@{cite "brucker.ea:isabelle-ontologies:2018"}, we deliberately
|
|
|
|
\<^enum> In the CICM 2018 paper~@{cite "brucker.ea:isabelle-ontologies:2018"}, we deliberately
|
|
|
|
refrain from integrating references to formal content in order demonstrate that \<^isadof> is not
|
|
|
|
refrain from integrating references to formal content in order to demonstrate that \<^isadof> is not
|
|
|
|
a framework from Isabelle users to Isabelle users only, but people just avoiding as much as
|
|
|
|
a framework from Isabelle users to Isabelle users only, but people just avoiding as much as
|
|
|
|
possible \<^LaTeX> notation.
|
|
|
|
possible \<^LaTeX> notation.
|
|
|
|
|
|
|
|
|
|
|
|
The \<^isadof> distribution contains both examples using the ontology \<^verbatim>\<open>scholarly_paper\<close> in
|
|
|
|
The \<^isadof> distribution contains both examples using the ontology \<^verbatim>\<open>scholarly_paper\<close> in
|
|
|
|
the directory \nolinkurl{examples/scholarly_paper/2018-cicm-isabelle_dof-applications/} or
|
|
|
|
the directory \nolinkurl{examples/scholarly_paper/2018-cicm-isabelle_dof-applications/} or
|
|
|
|
\nolinkurl{examples/scholarly_paper/2020-ifm-csp-applications/}.
|
|
|
|
\nolinkurl{examples/scholarly_paper/2020-iFM-CSP}.
|
|
|
|
|
|
|
|
|
|
|
|
You can inspect/edit the example in Isabelle's IDE, by either
|
|
|
|
You can inspect/edit the example in Isabelle's IDE, by either
|
|
|
|
\<^item> starting Isabelle/jedit using your graphical user interface (\<^eg>, by clicking on the
|
|
|
|
\<^item> starting Isabelle/jEdit using your graphical user interface (\<^eg>, by clicking on the
|
|
|
|
Isabelle-Icon provided by the Isabelle installation) and loading the file
|
|
|
|
Isabelle-Icon provided by the Isabelle installation) and loading the file
|
|
|
|
\nolinkurl{examples/scholarly_paper/2018-cicm-isabelle_dof-applications/IsaDofApplications.thy}.
|
|
|
|
\nolinkurl{examples/scholarly_paper/2018-cicm-isabelle_dof-applications/IsaDofApplications.thy},
|
|
|
|
\<^item> starting Isabelle/jedit from the command line by,\<^eg>, calling:
|
|
|
|
\<^item> starting Isabelle/jEdit from the command line by, \<^eg>, calling:
|
|
|
|
|
|
|
|
|
|
|
|
@{boxed_bash [display]\<open>ë\prompt{\isadofdirn}ë
|
|
|
|
@{boxed_bash [display]\<open>ë\prompt{\isadofdirn}ë
|
|
|
|
isabelle jedit -d . examples/scholarly_paper/2020-iFM-CSP/paper.thy \<close>}
|
|
|
|
isabelle jedit -d . examples/scholarly_paper/2020-iFM-CSP/paper.thy \<close>}
|
|
|
|
@ -270,7 +270,7 @@ text\<open> You can build the PDF-document at the command line by calling:
|
|
|
|
|
|
|
|
|
|
|
|
subsection*[sss::technical]\<open>A Bluffers Guide to the \<^verbatim>\<open>scholarly_paper\<close> Ontology\<close>
|
|
|
|
subsection*[sss::technical]\<open>A Bluffers Guide to the \<^verbatim>\<open>scholarly_paper\<close> Ontology\<close>
|
|
|
|
text\<open> In this section we give a minimal overview of the ontology formalized in
|
|
|
|
text\<open> In this section we give a minimal overview of the ontology formalized in
|
|
|
|
@{theory \<open>Isabelle_DOF.scholarly_paper\<close>}.\<close>
|
|
|
|
\<^theory>\<open>Isabelle_DOF.scholarly_paper\<close>.\<close>
|
|
|
|
|
|
|
|
|
|
|
|
text\<open> We start by modeling the usual text-elements of an academic paper: the title and author
|
|
|
|
text\<open> We start by modeling the usual text-elements of an academic paper: the title and author
|
|
|
|
information, abstract, and text section:
|
|
|
|
information, abstract, and text section:
|
|
|
|
@ -292,18 +292,18 @@ doc_class abstract =
|
|
|
|
principal_theorems :: "thm list"\<close>}
|
|
|
|
principal_theorems :: "thm list"\<close>}
|
|
|
|
\<close>
|
|
|
|
\<close>
|
|
|
|
|
|
|
|
|
|
|
|
text\<open>Note \<open>short_title\<close> and \<open>abbrev\<close> are optional and have the default \<open>None\<close> (no value).
|
|
|
|
text\<open>Note \<^const>\<open>short_title\<close> and \<^const>\<open>abbrev\<close> are optional and have the default\<^const>\<open>None\<close>
|
|
|
|
Note further, that abstracts may have a \<open>principal_theorems\<close> list, where the built-in \<^isadof> type
|
|
|
|
(no value). Note further, that \<^typ>\<open>abstract\<close>s may have a \<^const>\<open>principal_theorems\<close> list, where
|
|
|
|
\<open>thm list\<close> which contain references to formally proven theorems that must exist in the logical
|
|
|
|
the built-in \<^isadof> type \<^typ>\<open>thm list\<close> contains references to formally proven theorems that must
|
|
|
|
context of this document; this is a decisive feature of \<^isadof> that conventional ontological
|
|
|
|
exist in the logical context of this document; this is a decisive feature of \<^isadof> that
|
|
|
|
languages lack.\<close>
|
|
|
|
conventional ontological languages lack.\<close>
|
|
|
|
|
|
|
|
|
|
|
|
text\<open>We continue by the introduction of a main class: the text-element \<open>text_section\<close> (in contrast
|
|
|
|
text\<open>We continue by the introduction of a main class: the text-element \<^typ>\<open>text_section\<close>
|
|
|
|
to \<open>figure\<close> or \<open>table\<close> or similar). Note that
|
|
|
|
(in contrast to \<^typ>\<open>figure\<close> or \<open>table\<close> or similar). Note that
|
|
|
|
the \<open>main_author\<close> is typed with the class \<open>author\<close>, a HOL type that is automatically derived from
|
|
|
|
the \<^const>\<open>main_author\<close> is typed with the class \<^typ>\<open>author\<close>, a HOL type that is automatically
|
|
|
|
the document class definition \<open>author\<close> shown above. It is used to express which author currently
|
|
|
|
derived from the document class definition \<^typ>\<open>author\<close> shown above. It is used to express which
|
|
|
|
``owns'' this \<open>text_section\<close>, an information that can give rise to presentational or even
|
|
|
|
author currently ``owns'' this \<^typ>\<open>text_section\<close>, an information that can give rise to
|
|
|
|
access-control features in a suitably adapted front-end.
|
|
|
|
presentational or even access-control features in a suitably adapted front-end.
|
|
|
|
|
|
|
|
|
|
|
|
@{boxed_theory_text [display] \<open>
|
|
|
|
@{boxed_theory_text [display] \<open>
|
|
|
|
doc_class text_section = text_element +
|
|
|
|
doc_class text_section = text_element +
|
|
|
|
@ -312,16 +312,16 @@ doc_class text_section = text_element +
|
|
|
|
level :: "int option" <= "None"
|
|
|
|
level :: "int option" <= "None"
|
|
|
|
\<close>}
|
|
|
|
\<close>}
|
|
|
|
|
|
|
|
|
|
|
|
The \<open>level\<close>-attibute \<^index>\<open>level\<close> enables doc-notation support for headers, chapters, sections, and
|
|
|
|
The \<^const>\<open>Isa_COL.text_element.level\<close>-attibute \<^index>\<open>level\<close> enables doc-notation support for
|
|
|
|
subsections; we follow here the \<^LaTeX> terminology on levels to which \<^isadof> is currently targeting at.
|
|
|
|
headers, chapters, sections, and subsections; we follow here the \<^LaTeX> terminology on levels to which \<^isadof> is currently targeting at.
|
|
|
|
The values are interpreted accordingly to the \<^LaTeX> standard. The correspondance between the levels
|
|
|
|
The values are interpreted accordingly to the \<^LaTeX> standard. The correspondence between the levels
|
|
|
|
and the structural entities is summarized as follows:
|
|
|
|
and the structural entities is summarized as follows:
|
|
|
|
|
|
|
|
|
|
|
|
\<^item> part \<^index>\<open>part\<close> \<^bigskip>\<^bigskip> \<open>Some -1\<close> \vspace{-1cm}
|
|
|
|
\<^item> part \<^index>\<open>part\<close> \<open>Some -1\<close> \vspace{-0.3cm}
|
|
|
|
\<^item> chapter \<^index>\<open>chapter\<close> \<^bigskip>\<^bigskip> \<open>Some 0\<close> \vspace{-1cm}
|
|
|
|
\<^item> chapter \<^index>\<open>chapter\<close> \<open>Some 0\<close> \vspace{-0.3cm}
|
|
|
|
\<^item> section \<^index>\<open>section\<close> \<^bigskip>\<^bigskip> \<open>Some 1\<close> \vspace{-1cm}
|
|
|
|
\<^item> section \<^index>\<open>section\<close> \<open>Some 1\<close> \vspace{-0.3cm}
|
|
|
|
\<^item> subsection \<^index>\<open>subsection\<close> \<^bigskip>\<^bigskip> \<open>Some 2\<close> \vspace{-1cm}
|
|
|
|
\<^item> subsection \<^index>\<open>subsection\<close> \<open>Some 2\<close> \vspace{-0.3cm}
|
|
|
|
\<^item> subsubsection \<^index>\<open>subsubsection\<close> \<^bigskip>\<^bigskip> \<open>Some 3\<close> \vspace{-0.1cm}
|
|
|
|
\<^item> subsubsection \<^index>\<open>subsubsection\<close> \<open>Some 3\<close> \vspace{-0.1cm}
|
|
|
|
|
|
|
|
|
|
|
|
Additional means assure that the following invariant is maintained in a document
|
|
|
|
Additional means assure that the following invariant is maintained in a document
|
|
|
|
conforming to \<^verbatim>\<open>scholarly_paper\<close>:
|
|
|
|
conforming to \<^verbatim>\<open>scholarly_paper\<close>:
|
|
|
|
@ -329,11 +329,11 @@ conforming to \<^verbatim>\<open>scholarly_paper\<close>:
|
|
|
|
\center {\<open>level > 0\<close>}
|
|
|
|
\center {\<open>level > 0\<close>}
|
|
|
|
\<close>
|
|
|
|
\<close>
|
|
|
|
|
|
|
|
|
|
|
|
text\<open> The rest of the ontology introduces concepts for \<open>introductions\<close>, \<open>conclusion\<close>, \<open>related_work\<close>,
|
|
|
|
text\<open> The rest of the ontology introduces concepts for \<^typ>\<open>introduction\<close>, \<^typ>\<open>conclusion\<close>,
|
|
|
|
\<open>bibliography\<close> etc. More details can be found in \<^verbatim>\<open>scholarly_paper\<close> contained ion the
|
|
|
|
\<^typ>\<open>related_work\<close>, \<^typ>\<open>bibliography\<close> etc. More details can be found in \<^verbatim>\<open>scholarly_paper\<close>
|
|
|
|
theory @{theory \<open>Isabelle_DOF.scholarly_paper\<close>}. \<close>
|
|
|
|
contained ion the theory \<^theory>\<open>Isabelle_DOF.scholarly_paper\<close>. \<close>
|
|
|
|
|
|
|
|
|
|
|
|
subsection\<open>Writing Academic Publications I : A Freeform Mathematics Text \<close>
|
|
|
|
subsection\<open>Writing Academic Publications: A Freeform Mathematics Text \<close>
|
|
|
|
text*[csp_paper_synthesis::technical, main_author = "Some bu"]\<open>We present a typical mathematical
|
|
|
|
text*[csp_paper_synthesis::technical, main_author = "Some bu"]\<open>We present a typical mathematical
|
|
|
|
paper focussing on its form, not refering in any sense to its content which is out of scope here.
|
|
|
|
paper focussing on its form, not refering in any sense to its content which is out of scope here.
|
|
|
|
As mentioned before, we chose the paper~@{cite "taha.ea:philosophers:2020"} for this purpose,
|
|
|
|
As mentioned before, we chose the paper~@{cite "taha.ea:philosophers:2020"} for this purpose,
|
|
|
|
@ -345,9 +345,9 @@ figure*[fig0::figure,spawn_columns=False,relative_width="90",src="''figures/head
|
|
|
|
\<open> A mathematics paper as integrated document source ... \<close>
|
|
|
|
\<open> A mathematics paper as integrated document source ... \<close>
|
|
|
|
|
|
|
|
|
|
|
|
figure*[fig0B::figure,spawn_columns=False,relative_width="90",src="''figures/header_CSP_pdf.png''"]
|
|
|
|
figure*[fig0B::figure,spawn_columns=False,relative_width="90",src="''figures/header_CSP_pdf.png''"]
|
|
|
|
\<open> \ldots and as corresponding \<^pdf>-output. \<close>
|
|
|
|
\<open> ... and as corresponding \<^pdf>-output. \<close>
|
|
|
|
|
|
|
|
|
|
|
|
text\<open>The integrated source of this paper-except is shown in \<^figure>\<open>fig0\<close>, while the
|
|
|
|
text\<open>The integrated source of this paper-excerpt is shown in \<^figure>\<open>fig0\<close>, while the
|
|
|
|
document build process converts this to the corresponding \<^pdf>-output shown in \<^figure>\<open>fig0B\<close>.\<close>
|
|
|
|
document build process converts this to the corresponding \<^pdf>-output shown in \<^figure>\<open>fig0B\<close>.\<close>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
@ -358,7 +358,7 @@ The other text-elements provide the authors and the abstract as specified by the
|
|
|
|
to the \<^theory_text>\<open>doc_class\<close>es of \<^verbatim>\<open>scholarly_paper\<close>; we say that these text elements are \<^emph>\<open>instances\<close>
|
|
|
|
to the \<^theory_text>\<open>doc_class\<close>es of \<^verbatim>\<open>scholarly_paper\<close>; we say that these text elements are \<^emph>\<open>instances\<close>
|
|
|
|
\<^bindex>\<open>instance\<close> of the \<^theory_text>\<open>doc_class\<close>es \<^bindex>\<open>doc\_class\<close> of the underlying ontology. \<close>
|
|
|
|
\<^bindex>\<open>instance\<close> of the \<^theory_text>\<open>doc_class\<close>es \<^bindex>\<open>doc\_class\<close> of the underlying ontology. \<close>
|
|
|
|
|
|
|
|
|
|
|
|
text\<open>\vspace{1,5cm} The paper proceeds by providing instances for introduction, technical sections,
|
|
|
|
text\<open>The paper proceeds by providing instances for introduction, technical sections,
|
|
|
|
examples, \<^etc>. We would like to concentrate on one --- mathematical paper oriented --- detail in the
|
|
|
|
examples, \<^etc>. We would like to concentrate on one --- mathematical paper oriented --- detail in the
|
|
|
|
ontology \<^verbatim>\<open>scholarly_paper\<close>:
|
|
|
|
ontology \<^verbatim>\<open>scholarly_paper\<close>:
|
|
|
|
|
|
|
|
|
|
|
|
@ -380,25 +380,25 @@ doc_class "theorem" = math_content +
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
text\<open>The class \<^verbatim>\<open>technical\<close> regroups a number of text-elements that contain typical
|
|
|
|
text\<open>The class \<^verbatim>\<open>technical\<close> regroups a number of text-elements that contain typical
|
|
|
|
"technical content" in mathematical or engineering papers: code, definitions, theorems,
|
|
|
|
``technical content" in mathematical or engineering papers: code, definitions, theorems,
|
|
|
|
lemmas, examples. From this class, the more stricter class of @{typ \<open>math_content\<close>} is derived,
|
|
|
|
lemmas, examples. From this class, the more stricter class of @{typ \<open>math_content\<close>} is derived,
|
|
|
|
which is grouped into @{typ "definition"}s and @{typ "theorem"}s (the details of these
|
|
|
|
which is grouped into @{typ "definition"}s and @{typ "theorem"}s (the details of these
|
|
|
|
class definitions are omitted here). Note, however, that class identifiers can be abbreviated by
|
|
|
|
class definitions are omitted here). Note, however, that class identifiers can be abbreviated by
|
|
|
|
standard \<^theory_text>\<open>type_synonym\<close>s for convenience and enumeration types can be defined by the
|
|
|
|
standard \<^theory_text>\<open>type_synonym\<close>s for convenience and enumeration types can be defined by the
|
|
|
|
standard inductive \<^theory_text>\<open>datatype\<close> definition mechanism in Isabelle, since any HOL type is admitted
|
|
|
|
standard inductive \<^theory_text>\<open>datatype\<close> definition mechanism in Isabelle, since any HOL type is admitted
|
|
|
|
for attibute declarations. Vice-versa, document class definitions imply a corresponding HOL type
|
|
|
|
for attribute declarations. Vice-versa, document class definitions imply a corresponding HOL type
|
|
|
|
definition. \<close>
|
|
|
|
definition. \<close>
|
|
|
|
|
|
|
|
|
|
|
|
figure*[fig01::figure,spawn_columns=False,relative_width="95",src="''figures/definition-use-CSP.png''"]
|
|
|
|
figure*[fig01::figure,spawn_columns=False,relative_width="95",src="''figures/definition-use-CSP.png''"]
|
|
|
|
\<open> A screenshot of the integrated source with definitions ...\<close>
|
|
|
|
\<open> A screenshot of the integrated source with definitions ...\<close>
|
|
|
|
text\<open>An example for a sequence of (Isabelle-formula-)texts, their ontological declarations as
|
|
|
|
text\<open>An example for a sequence of (Isabelle-formula-)texts, their ontological declarations as
|
|
|
|
\<open>"definition"\<close>s in terms of the \<^verbatim>\<open>scholarly_paper\<close>-ontology and their type-conform referencing
|
|
|
|
\<^typ>\<open>definition\<close>s in terms of the \<^verbatim>\<open>scholarly_paper\<close>-ontology and their type-conform referencing
|
|
|
|
later is shown in \<^figure>\<open>fig01\<close> in its presentation as the integrated source.
|
|
|
|
later is shown in \<^figure>\<open>fig01\<close> in its presentation as the integrated source.
|
|
|
|
|
|
|
|
|
|
|
|
Note that the use in the ontology-generated antiquotation \<^theory_text>\<open>@{definition X4}\<close>
|
|
|
|
Note that the use in the ontology-generated antiquotation \<^theory_text>\<open>@{definition X4}\<close>
|
|
|
|
is type-checked; referencing \<^verbatim>\<open>X4\<close> as \<^theory_text>\<open>theorem\<close> would be a type-error and be reported directly
|
|
|
|
is type-checked; referencing \<^verbatim>\<open>X4\<close> as \<^theory_text>\<open>theorem\<close> would be a type-error and be reported directly
|
|
|
|
by \<^isadof> in Isabelle/jEdit. Note further, that if referenced correctly wrt. the sub-typing
|
|
|
|
by \<^isadof> in Isabelle/jEdit. Note further, that if referenced correctly wrt. the sub-typing
|
|
|
|
hierarchy makes \<^verbatim>\<open>X4\<close> \<^emph>\<open>navigable\<close> in Isabelle/jedit; a click will cause the IDE to present the
|
|
|
|
hierarchy makes \<^verbatim>\<open>X4\<close> \<^emph>\<open>navigable\<close> in Isabelle/jEdit; a click will cause the IDE to present the
|
|
|
|
defining occurrence of this text-element in the integrated source.
|
|
|
|
defining occurrence of this text-element in the integrated source.
|
|
|
|
|
|
|
|
|
|
|
|
% TODO:
|
|
|
|
% TODO:
|
|
|
|
@ -407,14 +407,13 @@ defining occurrence of this text-element in the integrated source.
|
|
|
|
|
|
|
|
|
|
|
|
Note, further, how \<^isadof>-commands like \<^theory_text>\<open>text*\<close> interact with standard Isabelle document
|
|
|
|
Note, further, how \<^isadof>-commands like \<^theory_text>\<open>text*\<close> interact with standard Isabelle document
|
|
|
|
antiquotations described in the Isabelle Isar Reference Manual in Chapter 4.2 in great detail.
|
|
|
|
antiquotations described in the Isabelle Isar Reference Manual in Chapter 4.2 in great detail.
|
|
|
|
We refrain ourselves here to briefly describe three freeform antiquotations used her in this text:
|
|
|
|
We refrain ourselves here to briefly describe three freeform antiquotations used in this text:
|
|
|
|
|
|
|
|
|
|
|
|
\<^item> the freeform term antiquotation, also called \<^emph>\<open>cartouche\<close>, written by
|
|
|
|
\<^item> the freeform term antiquotation, also called \<^emph>\<open>cartouche\<close>, written by
|
|
|
|
\<open>@{cartouche [style-parms] \<open>. . .\<close>\<close> or just by \<open>\<open>...\<close>\<close> if the list of style parameters
|
|
|
|
\<open>@{cartouche [style-parms] \<open>...\<close>}\<close> or just by \<open>\<open>...\<close>\<close> if the list of style parameters
|
|
|
|
is empty,
|
|
|
|
|
|
|
|
\<^item> the freeform antiquotation for theory fragments written \<open>@{theory_text [style-parms] \<open>...\<close>\<close>
|
|
|
|
|
|
|
|
or just \<^verbatim>\<open>\<^theory_text> \<open>...\<close>\<close> if the list of style parameters
|
|
|
|
|
|
|
|
is empty,
|
|
|
|
is empty,
|
|
|
|
|
|
|
|
\<^item> the freeform antiquotation for theory fragments written \<open>@{theory_text [style-parms] \<open>...\<close>}\<close>
|
|
|
|
|
|
|
|
or just \<^verbatim>\<open>\<^theory_text>\<close>\<open>\<open>...\<close>\<close> if the list of style parameters is empty,
|
|
|
|
\<^item> the freeform antiquotations for verbatim, emphasized, bold, or footnote text elements.
|
|
|
|
\<^item> the freeform antiquotations for verbatim, emphasized, bold, or footnote text elements.
|
|
|
|
\<close>
|
|
|
|
\<close>
|
|
|
|
|
|
|
|
|
|
|
|
@ -423,9 +422,10 @@ figure*[fig02::figure,spawn_columns=False,relative_width="95",src="''figures/def
|
|
|
|
|
|
|
|
|
|
|
|
text\<open>
|
|
|
|
text\<open>
|
|
|
|
\<^isadof> text-elements such as \<^theory_text>\<open>text*\<close> allow to have such standard term-antiquotations inside their
|
|
|
|
\<^isadof> text-elements such as \<^theory_text>\<open>text*\<close> allow to have such standard term-antiquotations inside their
|
|
|
|
text, permitting to give the whole text entity a formal, referentiable status with typed meta-
|
|
|
|
text, permitting to give the whole text entity a formal, referentiable status with typed
|
|
|
|
information attached to it that may be used for presentation issues, search, or other technical
|
|
|
|
meta-information attached to it that may be used for presentation issues, search,
|
|
|
|
purposes. The corresponding output of this snippet in the integrated source is shown in \<^figure>\<open>fig02\<close>.
|
|
|
|
or other technical purposes.
|
|
|
|
|
|
|
|
The corresponding output of this snippet in the integrated source is shown in \<^figure>\<open>fig02\<close>.
|
|
|
|
\<close>
|
|
|
|
\<close>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
@ -443,10 +443,10 @@ doc_class figure = text_section +
|
|
|
|
\<close>}
|
|
|
|
\<close>}
|
|
|
|
\<close>
|
|
|
|
\<close>
|
|
|
|
figure*[fig_figures::figure,spawn_columns=False,relative_width="85",src="''figures/Dogfood-figures''"]
|
|
|
|
figure*[fig_figures::figure,spawn_columns=False,relative_width="85",src="''figures/Dogfood-figures''"]
|
|
|
|
\<open> Declaring figures in the integrated source \ldots \<close>
|
|
|
|
\<open> Declaring figures in the integrated source.\<close>
|
|
|
|
|
|
|
|
|
|
|
|
text\<open>
|
|
|
|
text\<open>
|
|
|
|
The document class \<^boxed_theory_text>\<open>figure\<close> (supported by the \<^isadof> command abbreviation
|
|
|
|
The document class \<^typ>\<open>figure\<close> (supported by the \<^isadof> command abbreviation
|
|
|
|
\<^boxed_theory_text>\<open>figure*\<close>) makes it possible to express the pictures and diagrams
|
|
|
|
\<^boxed_theory_text>\<open>figure*\<close>) makes it possible to express the pictures and diagrams
|
|
|
|
as shown in \<^figure>\<open>fig_figures\<close>, which presents its own representation in the
|
|
|
|
as shown in \<^figure>\<open>fig_figures\<close>, which presents its own representation in the
|
|
|
|
integrated source as screenshot.\<close>
|
|
|
|
integrated source as screenshot.\<close>
|
|
|
|
@ -459,14 +459,11 @@ text\<open>
|
|
|
|
doc_class article =
|
|
|
|
doc_class article =
|
|
|
|
style_id :: string <= "''LNCS''"
|
|
|
|
style_id :: string <= "''LNCS''"
|
|
|
|
version :: "(int \<times> int \<times> int)" <= "(0,0,0)"
|
|
|
|
version :: "(int \<times> int \<times> int)" <= "(0,0,0)"
|
|
|
|
where "(title ~~ \<lbrakk>subtitle\<rbrakk> ~~ \<lbrace>author\<rbrace>$^+$+ ~~ abstract ~~
|
|
|
|
accepts "(title ~~ \<lbrakk>subtitle\<rbrakk> ~~ \<lbrace>author\<rbrace>\<^sup>+ ~~ abstract ~~ \<lbrace>introduction\<rbrace>\<^sup>+
|
|
|
|
introduction ~~ \<lbrace>technical || example\<rbrace>$^+$ ~~ conclusion ~~
|
|
|
|
~~ \<lbrace>background\<rbrace>\<^sup>* ~~ \<lbrace>technical || example \<rbrace>\<^sup>+ ~~ \<lbrace>conclusion\<rbrace>\<^sup>+
|
|
|
|
bibliography)"
|
|
|
|
~~ bibliography ~~ \<lbrace>annex\<rbrace>\<^sup>* )"
|
|
|
|
\<close>}\<close>
|
|
|
|
\<close>}\<close>
|
|
|
|
|
|
|
|
|
|
|
|
(* % TODO:
|
|
|
|
|
|
|
|
% Update to the new implementation.
|
|
|
|
|
|
|
|
% where is deprecated and the new implementation uses accepts and rejects. *)
|
|
|
|
|
|
|
|
text\<open>
|
|
|
|
text\<open>
|
|
|
|
In a integrated document source, the body of the content can be paranthesized into:
|
|
|
|
In a integrated document source, the body of the content can be paranthesized into:
|
|
|
|
|
|
|
|
|
|
|
|
@ -478,7 +475,7 @@ text\<open>
|
|
|
|
|
|
|
|
|
|
|
|
which signals to \<^isadof> begin and end of the part of the integrated source
|
|
|
|
which signals to \<^isadof> begin and end of the part of the integrated source
|
|
|
|
in which the text-elements instances are expected to appear in the textual ordering
|
|
|
|
in which the text-elements instances are expected to appear in the textual ordering
|
|
|
|
defined by \<^theory_text>\<open>article\<close>.
|
|
|
|
defined by \<^typ>\<open>article\<close>.
|
|
|
|
\<close>
|
|
|
|
\<close>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
@ -493,10 +490,10 @@ side_by_side_figure*["hyperlinks"::side_by_side_figure,anchor="''fig:Dogfood-IV-
|
|
|
|
caption="''Hyperlink to class-definition.''",relative_width="48",
|
|
|
|
caption="''Hyperlink to class-definition.''",relative_width="48",
|
|
|
|
src="''figures/Dogfood-IV-jumpInDocCLass''",anchor2="''fig:Dogfood-V-attribute''",
|
|
|
|
src="''figures/Dogfood-IV-jumpInDocCLass''",anchor2="''fig:Dogfood-V-attribute''",
|
|
|
|
caption2="''Exploring an attribute.''",relative_width2="47",
|
|
|
|
caption2="''Exploring an attribute.''",relative_width2="47",
|
|
|
|
src2="''figures/Dogfood-III-bgnd-text_section''"]\<open>Navigation via generated hyperlinks.\<close>
|
|
|
|
src2="''figures/Dogfood-V-attribute''"]\<open>Navigation via generated hyperlinks.\<close>
|
|
|
|
text\<open>
|
|
|
|
text\<open>
|
|
|
|
From these class definitions, \<^isadof> also automatically generated editing
|
|
|
|
From these class definitions, \<^isadof> also automatically generated editing
|
|
|
|
support for Isabelle/jedit. In \autoref{fig-Dogfood-II-bgnd1} and
|
|
|
|
support for Isabelle/jEdit. In \autoref{fig-Dogfood-II-bgnd1} and
|
|
|
|
\autoref{fig-bgnd-text_section} we show how hovering over links permits to explore its
|
|
|
|
\autoref{fig-bgnd-text_section} we show how hovering over links permits to explore its
|
|
|
|
meta-information. Clicking on a document class identifier permits to hyperlink into the
|
|
|
|
meta-information. Clicking on a document class identifier permits to hyperlink into the
|
|
|
|
corresponding class definition (\autoref{fig:Dogfood-IV-jumpInDocCLass}); hovering over an
|
|
|
|
corresponding class definition (\autoref{fig:Dogfood-IV-jumpInDocCLass}); hovering over an
|
|
|
|
@ -557,10 +554,10 @@ text\<open>
|
|
|
|
The \<^isadof> distribution contains a small example using the ontology ``CENELEC\_50128'' in
|
|
|
|
The \<^isadof> distribution contains a small example using the ontology ``CENELEC\_50128'' in
|
|
|
|
the directory \nolinkurl{examples/CENELEC_50128/mini_odo/}. You can inspect/edit the
|
|
|
|
the directory \nolinkurl{examples/CENELEC_50128/mini_odo/}. You can inspect/edit the
|
|
|
|
integrated source example by either
|
|
|
|
integrated source example by either
|
|
|
|
\<^item> starting Isabelle/jedit using your graphical user interface (\<^eg>, by clicking on the
|
|
|
|
\<^item> starting Isabelle/jEdit using your graphical user interface (\<^eg>, by clicking on the
|
|
|
|
Isabelle-Icon provided by the Isabelle installation) and loading the file
|
|
|
|
Isabelle-Icon provided by the Isabelle installation) and loading the file
|
|
|
|
\nolinkurl{examples/CENELEC_50128/mini_odo/mini_odo.thy}.
|
|
|
|
\nolinkurl{examples/CENELEC_50128/mini_odo/mini_odo.thy}.
|
|
|
|
\<^item> starting Isabelle/jedit from the command line by calling:
|
|
|
|
\<^item> starting Isabelle/jEdit from the command line by calling:
|
|
|
|
|
|
|
|
|
|
|
|
@{boxed_bash [display]\<open>ë\prompt{\isadofdirn}ë
|
|
|
|
@{boxed_bash [display]\<open>ë\prompt{\isadofdirn}ë
|
|
|
|
isabelle jedit examples/CENELEC_50128/mini_odo/mini_odo.thy \<close>}
|
|
|
|
isabelle jedit examples/CENELEC_50128/mini_odo/mini_odo.thy \<close>}
|
|
|
|
@ -773,7 +770,7 @@ of ontologies and document templates (see @{docitem (unchecked) \<open>isadof_on
|
|
|
|
|
|
|
|
|
|
|
|
Restricting the use of \<^LaTeX> has two advantages: first, \<^LaTeX> commands can circumvent the
|
|
|
|
Restricting the use of \<^LaTeX> has two advantages: first, \<^LaTeX> commands can circumvent the
|
|
|
|
consistency checks of \<^isadof> and, hence, only if no \<^LaTeX> commands are used, \<^isadof> can
|
|
|
|
consistency checks of \<^isadof> and, hence, only if no \<^LaTeX> commands are used, \<^isadof> can
|
|
|
|
ensure that a document that does not generate any error messages in Isabelle/jedit also generated
|
|
|
|
ensure that a document that does not generate any error messages in Isabelle/jEdit also generated
|
|
|
|
a PDF document. Second, future version of \<^isadof> might support different targets for the
|
|
|
|
a PDF document. Second, future version of \<^isadof> might support different targets for the
|
|
|
|
document generation (\<^eg>, HTML) which, naturally, are only available to documents not using
|
|
|
|
document generation (\<^eg>, HTML) which, naturally, are only available to documents not using
|
|
|
|
too complex native \<^LaTeX>-commands.
|
|
|
|
too complex native \<^LaTeX>-commands.
|
|
|
|
|
